STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY48003.1PPOX class probable F420-dependent enzyme; TIGRFAM:TIGR03618:F420-binding domain, putative; Pfam:PF01243:Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SUPERFAMILY:SSF50475:FMN-binding split barrel; Rv1155_F420. (146 aa)    
Predicted Functional Partners:
AHY45715.1
COG:COG2141: Coenzyme F420-dependent N5N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion]; Pfam:PF00296:Luciferase-like domain; Pfam:PF00296:Luciferase-like domain; SUPERFAMILY:SSF51679:Luciferase-like domain.
  
     0.627
AHY46154.1
TIGRFAM:TIGR01916:Coenzyme F420:L-glutamate ligase, bacterial and archeal; COG:COG1478: Uncharacterized conserved protein [Function unknown]; Pfam:PF01996:Coenzyme F420:L-glutamate ligase-like domain; SUPERFAMILY:SSF144010:No Description;KEGG: 00380; UniPathway: UPA00071.
 
     0.620
AHY45428.1
Putative F420-dependent oxidoreductase, Rv1855c family; TIGRFAM:TIGR03560:F420-dependent oxidoreductase-predicted, Rv1855c; COG:COG2141: Coenzyme F420-dependent N5N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion]; Pfam:PF00296:Luciferase-like domain; SUPERFAMILY:SSF51679:Luciferase-like domain.
  
     0.520
AHY48004.1
Methyltransferase domain; COG:COG2226: Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]; Pfam:PF08241:Methyltransferase type 11; ProSitePatterns:PS00879:Orn/DAP/Arg decarboxylase 2, conserved site; SUPERFAMILY:SSF53335:No Description.
       0.514
AHY46151.1
TIGRFAM:TIGR01819:LPPG:Fo 2-phospho-L-lactate transferase; COG:COG0391: Uncharacterized conserved protein [Function unknown]; Pfam:PF01933:LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052; Hamap:MF_01257:LPPG:Fo 2-phospho-L-lactate transferase; SUPERFAMILY:SSF142338:No Description;KEGG: 00440; KEGG: 00513; KEGG: 00564; KEGG: 00600; UniPathway: UPA00071.
  
     0.483
AHY47449.1
yfcH: TIGR01777 family protein; TIGRFAM:TIGR01777:Sugar nucleotide epimerase YfcH,-like putative; COG:COG1090: Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]; Pfam:PF08338:Domain of unknown function DUF1731, C-terminal; SUPERFAMILY:SSF51735:No Description.
   
    0.482
AHY47394.1
TIGRFAM:TIGR00026:Deazaflavin-dependent nitroreductase; Pfam:PF04075:Deazaflavin-dependent nitroreductase;KEGG: 00121; KEGG: 00231; KEGG: 00520; KEGG: 00592; KEGG: 00633; KEGG: 00860; KEGG: 00906; KEGG: 00950; KEGG: 00981; hi_GC_TIGR00026.
  
     0.477
AHY46320.1
COG:COG2047: Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]; Pfam:PF09754:Proteasome assembly chaperone 2; Pfam:PF09754:Proteasome assembly chaperone 2; PIRSF:PIRSF028754:Protein of unknown function DUF774; SUPERFAMILY:SSF159659:No Description.
  
     0.453
AHY45877.1
PPOX class probable F420-dependent enzyme; TIGRFAM:TIGR03618:F420-binding domain, putative; COG:COG3871: Uncharacterized stress protein (general stress protein 26) [General function prediction only]; Pfam:PF01243:Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SUPERFAMILY:SSF50475:FMN-binding split barrel.
  
     0.449
AHY47395.1
COG:COG0842: ABC-type multidrug transport system permease component [Defense mechanisms]; Pfam:PF01061:ABC-2 type transporter; Pfam:PF01061:ABC-2 type transporter; PIRSF:PIRSF006648:No Description.
  
     0.426
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (30%) [HD]
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