STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY48032.1COG:COG1012: NAD-dependent aldehyde dehydrogenases [Energy production and conversion]; Pfam:PF00171:Aldehyde dehydrogenase domain; Pfam:PF00171:Aldehyde dehydrogenase domain; ProSitePatterns:PS00687:Aldehyde dehydrogenase, conserved site; SUPERFAMILY:SSF53720:Aldehyde/histidinol dehydrogenase; Belongs to the aldehyde dehydrogenase family. (458 aa)    
Predicted Functional Partners:
AHY48031.1
COG:COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis transport and catabolism / General function prediction only]; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; PRINTS:PR00081:Glucose/ribitol dehydrogenase; SUPERFAMILY:SSF51735:No Description.
   0.862
AHY48034.1
COG:COG0174: Glutamine synthetase [Amino acid transport and metabolism]; Pfam:PF00120:Glutamine synthetase, catalytic domain; Pfam:PF00120:Glutamine synthetase, catalytic domain; SUPERFAMILY:SSF55931:No Description.
 
  
 0.848
AHY48033.1
COG:COG2071: Predicted glutamine amidotransferases [General function prediction only]; Pfam:PF07722:Peptidase C26; Pfam:PF07722:Peptidase C26; ProSiteProfiles:PS51273:Glutamine amidotransferase; SUPERFAMILY:SSF52317:No Description.
 
    0.784
AHY48035.1
TIGRFAM:TIGR00908:Ethanolamine permease; COG:COG0833: Amino acid transporters [Amino acid transport and metabolism]; Pfam:PF13520:Amino acid permease; PIRSF:PIRSF006060:Amino acid/polyamine transporter I.
 
 
 0.778
AHY48030.1
COG:COG0031: Cysteine synthase [Amino acid transport and metabolism]; Pfam:PF00291:Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily; Pfam:PF00291:Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily; ProSitePatterns:PS00901:Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site; SUPERFAMILY:SSF53686:Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily.
  
 
 0.657
AHY45603.1
COG:COG0506: Proline dehydrogenase [Amino acid transport and metabolism]; Pfam:PF01619:Proline dehydrogenase; Pfam:PF01619:Proline dehydrogenase; PIRSF:PIRSF000196:Proline dehydrogenase, predicted; SUPERFAMILY:SSF51730:No Description.
 
 
 0.604
AHY48036.1
COG:COG2188: Transcriptional regulators [Transcription]; Pfam:PF00392:Transcription regulator HTH, GntR; Pfam:PF00392:Transcription regulator HTH, GntR; PRINTS:PR00035:Transcription regulator HTH, GntR; ProSiteProfiles:PS50949:Transcription regulator HTH, GntR; SMART:SM00345:Transcription regulator HTH, GntR; SUPERFAMILY:SSF64288:No Description.
     
 0.533
AHY48037.1
TIGRFAM:TIGR02222:Export-related chaperone protein CsaA; COG:COG0073: EMAP domain [General function prediction only]; Pfam:PF01588:tRNA-binding domain; ProSiteProfiles:PS50886:tRNA-binding domain; SUPERFAMILY:SSF50249:Nucleic acid-binding, OB-fold; chap_CsaA.
     
 0.483
fmt
Fmt: methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.446
AHY45602.1
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.424
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (20%) [HD]
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