STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY48039.1Hypothetical protein; COG:COG2013: Uncharacterized conserved protein [Function unknown]; Pfam:PF01987:Mitochondrial biogenesis protein AIM24; Pfam:PF01987:Mitochondrial biogenesis protein AIM24; SUPERFAMILY:SSF51219:Tryptophan RNA-binding attenuator protein-like domain. (230 aa)    
Predicted Functional Partners:
AHY48040.1
F420-dependent oxidoreductase, G6PDH family; TIGRFAM:TIGR03557:F420-dependent glucose-6-phosphate dehydrogenase-related; COG:COG2141: Coenzyme F420-dependent N5N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion]; Pfam:PF00296:Luciferase-like domain; SUPERFAMILY:SSF51679:Luciferase-like domain.
       0.556
AHY48038.1
EAL domain; COG:COG2200: FOG: EAL domain [Signal transduction mechanisms]; Pfam:PF00563:Diguanylate phosphodiesterase, EAL domain; ProSiteProfiles:PS50883:Diguanylate phosphodiesterase, EAL domain; SMART:SM00052:Diguanylate phosphodiesterase, EAL domain; SUPERFAMILY:SSF141868:Diguanylate phosphodiesterase, EAL domain.
       0.519
AHY47841.1
PhoD-like phosphatase; COG:COG3540: Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]; Pfam:PF09423:Alkaline phosphatase D-related; SUPERFAMILY:SSF56300:No Description.
  
     0.485
AHY47572.1
Fusaric acid resistance protein-like; COG:COG4129: Predicted membrane protein [Function unknown]; Pfam:PF13515:Fusaric acid resistance protein-like.
 
     0.443
AHY46210.1
COG:COG4671: Predicted glycosyl transferase [General function prediction only]; Pfam:PF13528:Glycosyl transferase family 1; SUPERFAMILY:SSF53756:No Description.
  
     0.434
AHY46212.1
COG:COG1216: Predicted glycosyltransferases [General function prediction only]; Pfam:PF13641:Glycosyltransferase like family 2; SUPERFAMILY:SSF53448:No Description.
  
     0.427
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.