STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y3BWV8RT_RNaseH_2 domain-containing protein. (140 aa)    
Predicted Functional Partners:
A0A251VQN1
RT_RNaseH_2 domain-containing protein.
  
     0.507
A0A251TRQ2
Putative reverse transcriptase domain-containing protein.
  
     0.472
A0A251STT5
Putative ribonuclease H-like domain-containing protein.
  
     0.471
A0A251S0W8
Putative reverse transcriptase domain-containing protein.
  
     0.466
A0A251SG62
Putative reverse transcriptase domain, Zinc finger, CCHC-type, Aspartic peptidase domain protein.
  
     0.457
A0A251UAL7
Putative reverse transcriptase domain, Aspartic peptidase domain protein.
  
     0.453
A0A251SVV5
Putative reverse transcriptase domain-containing protein.
  
     0.452
A0A251VKA3
Putative reverse transcriptase domain-containing protein.
  
     0.452
A0A251UM74
Putative reverse transcriptase domain-containing protein.
  
     0.451
A0A251VD48
Putative reverse transcriptase domain-containing protein.
  
     0.451
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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