STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CT-BMYBeta-amylase. (594 aa)    
Predicted Functional Partners:
DPE2
Putative disproportionating enzyme 2.
     
 0.781
ATISA3
Putative isoamylase 3.
     
 0.762
DPEP
4-alpha-glucanotransferase.
     
 0.754
A0A251V019
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.727
ATAMY2
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
     
 0.726
PHSH
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.726
AMYA
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
     
 0.726
AMY1
Alpha-amylase.
     
 0.726
GLGB1
Putative 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic.
     
 0.725
ISA1
Putative isoamylase 1.
     
 0.725
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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