Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
A0A251RLE7RBR-type E3 ubiquitin transferase. (244 aa)    
Predicted Functional Partners:
ERF3A
Putative eukaryotic peptide chain release factor GTP-binding subunit ERF3A.
   
 
 0.781
A0A251T0Z4
Putative translation elongation factor EF1A/initiation factor IF2gamma family protein.
   
 
 0.781
A0A251RX97
Putative ATP synthase subunit O.
    
   0.607
A0A251S2A6
Putative ATP synthase subunit O.
    
   0.607
A0A251SXC6
Putative ATPase, OSCP/delta subunit, F1F0 ATP synthase OSCP/delta subunit domain protein.
    
   0.607
ATPD
Putative ATP synthase.
    
   0.607
ATPD-2
Putative ATP synthase delta-subunit.
    
   0.607
A0A251VJQ1
Putative ATPase, OSCP/delta subunit, F1F0 ATP synthase OSCP/delta subunit domain protein.
    
   0.607
A0A251VQ91
Putative ATP synthase subunit O.
    
   0.607
RS27A
Putative ubiquitin-40S ribosomal protein S27a.
     
  0.527
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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