STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RLJ2Putative cytidine/deoxycytidylate deaminase family protein. (599 aa)    
Predicted Functional Partners:
A0A251SAQ7
Putative cytidine/deoxycytidylate deaminase family protein.
   
 0.924
RIBA2
Putative bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic.
 
  
 0.915
A0A251TL68
Putative 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB.
 
  
 0.915
RIBA1
Putative bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic.
 
  
 0.915
A0A251VMQ6
Putative DHBP synthase RibB-like alpha/beta domain,GTP cyclohydrolase II.
 
  
 0.915
A0A251TI20
Putative GTP cyclohydrolase II, RibA, GTP cyclohydrolase II.
 
  
 0.914
A0A251T7W2
Putative HAD hydrolase, subfamily IA.
     
 0.913
A0A251U9W5
Putative haloacid dehalogenase-like hydrolase (HAD) superfamily protein.
     
  0.900
A0A251SBZ0
Putative dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 
 0.807
DRTS
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.807
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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