STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RLS3Uncharacterized protein. (99 aa)    
Predicted Functional Partners:
A0A251UBB9
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.966
A0A251SDM0
Putative RNase P subunit p30.
   
 0.965
A0A251TBL0
DUF4477 domain-containing protein.
    
 
 0.931
A0A251S7D9
Putative KRR1 family protein.
   
   0.884
A0A251SDZ7
Putative DNA/RNA-binding protein Alba-like protein.
    
 0.629
A0A251SEL8
Putative thioredoxin superfamily protein.
    
 0.629
A0A251SMN5
Putative alba DNA/RNA-binding protein.
    
 0.629
A0A251T2D9
Putative DNA/RNA-binding protein Alba-like protein.
    
 0.629
A0A251TI27
Putative DNA/RNA-binding protein Alba-like protein.
    
 0.629
A0A251UMS4
Putative thioredoxin superfamily protein.
    
 0.629
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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