STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXGT-A4Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (300 aa)    
Predicted Functional Partners:
MAG1
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.675
VPS29
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.675
VPS26B
Putative vacuolar protein sorting 26B.
    
 
 0.663
VPS26A
Putative vacuolar protein sorting 26A.
    
 
 0.663
PAT2
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 0.495
VPS35A
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.482
A0A251SMM2
Uncharacterized protein.
   
 
 0.482
A0A251T135
Uncharacterized protein.
   
 
 0.482
VPS35B
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.482
A0A251TYL8
Putative vacuolar protein sorting-associated protein 35.
   
 
 0.482
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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