STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RME0Putative alpha/Beta hydrolase fold protein. (510 aa)    
Predicted Functional Partners:
A0A251RRQ8
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 
 0.979
A0A251TAU8
Putative binding protein.
   
 
 0.979
A0A251U9B9
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.979
A0A251UGQ9
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.977
A0A251U2T7
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.975
A0A251SYX3
Putative ribosomal protein L24e family protein.
   
 
 0.971
RLP24
Putative ribosome biogenesis protein RLP24.
   
 
 0.971
A0A251T6F9
Putative ribosomal RNA processing Brix domain protein.
   
 
 0.964
A0A251TNK7
Putative ribosomal RNA processing Brix domain protein.
   
 
 0.964
A0A251USD9
Putative transducin/WD40 repeat-like superfamily protein.
   
 
 0.962
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.