STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RN09Putative tetratricopeptide-like helical domain, Protein SirB1. (430 aa)    
Predicted Functional Partners:
RS27A
Putative ubiquitin-40S ribosomal protein S27a.
   
  0.609
A0A251T2C4
Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein.
   
  0.609
ECR1
Putive biquitin-activating enzyme, E1, active site protein.
    
 0.574
RAD50
Putative DNA repair-recombination protein (RAD50).
    
 0.530
A0A251SUA4
Putative ku70.
     
 0.516
NBS1
Putative nijmegen breakage syndrome 1.
    
 0.458
A0A251RZ84
Putative F-box domain-containing protein.
    
  0.455
A0A251S2K1
Putative F-box domain-containing protein.
    
  0.455
A0A251S2R9
Putative F-box domain-containing protein.
    
  0.455
A0A251S6R9
Putative F-box domain-containing protein.
    
  0.455
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.