Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A251RNA8Putative glucose/ribitol dehydrogenase. (223 aa)    
Predicted Functional Partners:
PCB2
Putative NAD(P)-binding Rossmann-fold superfamily protein.
   
 
 0.983
A0A251TAS9
Putative pheophorbide a oxygenase, Rieske [2Fe-2S] iron-sulfur domain protein.
  
 
 0.959
CRD1
Putative magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase protein.
   
 
 0.955
CHLG
Putative chlorophyll synthase protein.
   
 0.937
CAO
Putative chlorophyllide a oxygenase protein.
  
 
 0.905
A0A251VKX3
Putative chlorophyllase, Alpha/Beta hydrolase fold protein.
   
 
 0.896
A0A251RQ47
Putative chlorophyllase.
     
 0.868
ATCLH2
Putative chlorophyllase 2.
     
 0.868
HEM11
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
      
 0.841
A0A251UR08
Staygreen domain-containing protein.
     
  0.839
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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