STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTI13Putative vesicle transport v-SNARE 13. (220 aa)    
Predicted Functional Partners:
SYP52
Putative syntaxin of plants 52.
   
 0.968
A0A251UW18
Putative target SNARE coiled-coil-like domain-containing protein.
   
 0.968
A0A251V8F1
Putative target SNARE coiled-coil-like domain-containing protein.
   
 0.968
SYP23
Putative syntaxin of plants 23; Belongs to the syntaxin family.
   
 0.962
A0A251SWY6
Putative t-SNARE; Belongs to the syntaxin family.
   
 0.962
VAM3
Putative syntaxin/t-SNARE family protein; Belongs to the syntaxin family.
   
 0.962
SYP21
Putative syntaxin of plants 21; Belongs to the syntaxin family.
   
 0.962
A0A251RNP2
Putative target SNARE coiled-coil-like domain-containing protein; Belongs to the syntaxin family.
   
 0.949
A0A251TIJ1
Putative t-SNARE; Belongs to the syntaxin family.
   
 0.949
SYP43
Putative syntaxin of plants 43; Belongs to the syntaxin family.
   
 0.949
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.