STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATHB54Putative homeobox protein 54. (202 aa)    
Predicted Functional Partners:
A0A251SSY6
mRNA cap guanine-N7 methyltransferase.
   
 
 0.936
ENS
Putative ARM repeat superfamily protein.
   
 
 0.909
A0A251SK58
Uncharacterized protein.
   
 
 0.877
A0A251SNY4
Nuclear cap-binding protein subunit 2.
   
 
 0.877
CBP20
Nuclear cap-binding protein subunit 2.
   
 
 0.877
RBP36A
Putative DNA-directed RNA polymerase family protein.
   
 
 0.753
A0A251V6S4
Putative DNA-directed RNA polymerase, alpha subunit.
   
 
 0.753
A0A251RQB6
Putative DNA helicase, UvrD/REP type, P-loop containing nucleoside triphosphate hydrolase.
   
 
 0.735
A0A251S445
Putative P-loop containing nucleoside triphosphate hydrolase.
   
 
 0.735
A0A251SF45
Putative leucine-rich repeat domain, L domain-like protein.
   
 
 0.735
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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