Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RPI7Uncharacterized protein. (441 aa)    
Predicted Functional Partners:
A0A251S0T0
Citrate synthase; Belongs to the citrate synthase family.
  
 0.917
CYSZ
Citrate synthase.
  
 0.917
CSY2
Citrate synthase.
  
 0.917
A0A251VRK6
Citrate synthase; Belongs to the citrate synthase family.
  
 0.917
ASP1
Aspartate aminotransferase.
   
 0.893
A0A251SRW3
Aspartate aminotransferase.
   
 0.893
A0A251SZ13
Aspartate aminotransferase.
   
 0.893
A0A251TU44
Putative aspartate/other aminotransferase, Pyridoxal phosphate-dependent transferase.
   
 0.893
ASP3
Aspartate aminotransferase.
   
 0.893
ASP5
Aspartate aminotransferase.
   
 0.893
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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