Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LDHAL-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (351 aa)    
Predicted Functional Partners:
PGI1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.976
G6PI1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.970
A0A251SNB2
Putative pyruvate kinase family protein.
  
 0.957
ASP1
Aspartate aminotransferase.
   
 0.944
A0A251VRV6
Aspartate aminotransferase.
   
 0.944
A0A251SZ13
Aspartate aminotransferase.
   
 0.940
ASP3
Aspartate aminotransferase.
   
 0.940
KPYA
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.936
PKP1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.936
AGT
Putative alanine:glyoxylate aminotransferase.
  
 
 0.936
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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