STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RQL1Putative ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (63 aa)    
Predicted Functional Partners:
A0A251UJC4
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.913
A0A251UHM5
Putative ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.908
A0A251UZX8
Putative sequence-specific DNA binding transcription factor.
   
 
 0.907
A0A251TS84
Putative translation elongation factor EF1B/ribosomal protein S6 family protein.
   
 
 0.905
A0A251UG36
Putative ribosomal L5P family protein.
  
 0.891
RK24
Putative 50S ribosomal protein L24 protein; Belongs to the universal ribosomal protein uL24 family.
  
 0.891
A0A251SBZ4
Putative ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein.
   
 
 0.888
A0A251UZ72
Putative ribosomal protein L33, Zinc-binding ribosomal protein.
  
 0.885
A0A251S2J9
Putative ribosomal protein L37ae, Zinc-binding ribosomal protein.
   
 0.878
A0A251RYG8
Putative ribosomal protein L19, Translation protein SH3-like domain protein.
   
 0.863
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.