STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RR71Putative zinc finger, CCHC-type, Cold shock, CspA. (225 aa)    
Predicted Functional Partners:
A0A251TNY2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.633
ENS
Putative ARM repeat superfamily protein.
    
  0.572
A0A251RWL8
Putative ribosomal protein L31.
  
 
 0.551
A0A251U050
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.551
NRPB6A
Putative RNA polymerase Rpb6.
  
 
 0.550
NRPB6B
Putative RNA polymerase Rpb6.
  
 
 0.550
A0A251UJC4
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.548
A0A251TK18
Putative mRNA splicing factor Cwf21 domain-containing protein.
     
 0.540
A0A251VBP8
Uncharacterized protein.
     
 0.540
SMD3
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
   
 0.520
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.