STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RRT2Putative DEAD/DEAH box RNA helicase family protein. (1213 aa)    
Predicted Functional Partners:
A0A251SIR3
Putative zinc ion binding protein.
    
 0.982
ERCC1
Putative nucleotide repair protein, putative.
    
 0.980
A0A251SKC6
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
 0.975
A0A251TA89
Putative nuclear pore localization protein NPL4.
    
 0.973
ATMUS81
Putative restriction endonuclease, type II-like superfamily protein.
    
 0.973
A0A251TR05
DUF1767 domain-containing protein.
    
 
 0.940
MIM
Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein.
   
 
 0.938
A0A251VFZ7
Uncharacterized protein.
   
 
 0.934
SMC5
Putative structural maintenance of chromosomes 5.
   
 
 0.934
RS27A
Putative ubiquitin-40S ribosomal protein S27a.
   
 0.925
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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