Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RSC4Putative zinc finger, RING/FYVE/PHD-type. (247 aa)    
Predicted Functional Partners:
BB
Putative RING/U-box superfamily protein.
  
   
 0.596
A0A251S813
Putative zinc finger, RING/FYVE/PHD-type.
  
   
 0.490
A0A251U5G3
Putative zinc finger, RING/FYVE/PHD-type.
  
     0.486
A0A1Y3BV48
Putative zinc finger, RING/FYVE/PHD-type.
  
   
 0.483
A0A251SH98
Putative zinc finger, RING/FYVE/PHD-type.
  
   
 0.478
A0A251S421
Putative zinc finger, RING/FYVE/PHD-type.
  
   
 0.433
A0A251VC35
Putative zinc finger, RING/FYVE/PHD-type.
  
     0.423
ATL8
Putative RING/U-box superfamily protein.
  
   
 0.410
A0A251V9D2
Putative zinc finger, RING/FYVE/PHD-type.
  
     0.406
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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