Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A251RSP2ArgoN domain-containing protein. (217 aa)    
Predicted Functional Partners:
NRPD1B
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.785
A0A251SD04
Uncharacterized protein.
    
 0.751
A0A251UKZ5
Putative RNA polymerase, alpha subunit.
    
 0.751
A0A251VE58
Uncharacterized protein.
    
 0.751
A0A251VRR1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.751
A0A251T1J5
Putative translin family protein.
    
 0.669
A0A251SR02
Putative ribonuclease III domain-containing protein.
   
 0.664
DCL3A
Putative endoribonuclease Dicer.
   
 0.664
A0A251V5E7
Putative ribonuclease III domain-containing protein.
   
 0.664
DCL2
Putative dicer-like 2; Belongs to the helicase family. Dicer subfamily.
   
 0.660
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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