STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIKPutative RS2-interacting KH protein. (553 aa)    
Predicted Functional Partners:
A0A251TM63
Putative C2H2 and C2HC zinc fingers superfamily protein.
      
 0.580
RKP
Putative related to KPC1.
      
 0.553
A0A251T5I0
Uncharacterized protein.
      
 0.553
A0A251T8Q0
Uncharacterized protein.
      
 0.553
A0A251TCA2
Uncharacterized protein.
      
 0.553
A0A251TJ21
Putative B30.2/SPRY domain-containing protein.
      
 0.553
ATCDC5
Putative cell division cycle 5.
    
 
 0.551
A0A251SST1
Putative glycoside hydrolase, family 28, Pectin lyase fold/virulence factor.
      
 0.533
A0A251VJH9
Putative pectin lyase-like superfamily protein.
      
 0.533
HIRA
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
      
 0.524
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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