STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RT99Alkyl transferase; Belongs to the UPP synthase family. (242 aa)    
Predicted Functional Partners:
A0A251SI51
Uncharacterized protein.
   
 0.876
LEW1
Putative undecaprenyl pyrophosphate synthetase family protein.
   
 0.876
CS
Putative alpha-copaene synthase.
     
 0.800
FPPS
Putative farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.798
FPPS1
Putative farnesyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family.
  
 
 0.798
A0A251SDL7
Putative polyprenyl synthetase-related protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.792
GGPPS
Putative geranylgeranyl pyrophosphate synthase, chloroplastic; Belongs to the FPP/GGPP synthase family.
  
 
 0.792
GGR
Putative geranylgeranyl reductase; Belongs to the FPP/GGPP synthase family.
  
 
 0.792
A0A251U2J5
Putative polyprenyl synthetase-related protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.792
A0A251U507
Putative polyprenyl synthetase-related protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.792
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.