STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGR5Putative C2H2-like zinc finger protein. (383 aa)    
Predicted Functional Partners:
A0A251VT38
Putative small auxin-up RNA.
      
 0.699
ARG7
Putative indole-3-acetic acid-induced protein ARG7.
      
 0.698
AIR12
Putative auxin-responsive family protein.
      
 0.693
AIR12-2
Putative auxin-responsive family protein.
      
 0.693
RHD3
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
      
 0.623
A0A251TS84
Putative translation elongation factor EF1B/ribosomal protein S6 family protein.
    
  0.568
A0A251U6I0
Putative 28S ribosomal protein S29-related protein.
    
  0.558
A0A251RR84
Putative SNF2-related, N-terminal domain-containing protein.
    
 0.557
A0A251V685
Uncharacterized protein.
    
 0.557
A0A251SG72
Putative ARID DNA-binding domain, High mobility group box domain protein.
    
 0.538
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.