STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RUT2Putative S-phase kinase-associated protein 1-like, S-phase kinase-associated protein 1; Belongs to the SKP1 family. (156 aa)    
Predicted Functional Partners:
ATFBP7
Putative F-box protein 7.
    
 0.909
A0A251VFX3
Putative zinc ion binding protein.
    
 0.904
SGT1
Putative SGT1-like protein.
   
 
 0.766
SGT1A
Putative phosphatase.
   
 
 0.766
A0A251SPL2
Putative zinc finger, RING/FYVE/PHD-type.
   
 0.757
RBX1A
Putative RING-box protein 1A.
   
 0.755
A0A251SPF5
Uncharacterized protein.
   
 0.755
A0A251T1F8
Putative zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-H2-type.
   
 0.755
A0A251TDW3
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
    
 0.755
A0A251U0P6
Putative zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-H2-type.
   
 0.755
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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