STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD23BPutative rad23 UV excision repair protein family. (376 aa)    
Predicted Functional Partners:
ATRAD4
Putative DNA repair protein Rad4 family.
   
 0.974
AtPNG1
Putative peptide-N-glycanase 1.
    
 0.973
A0A251RXD3
Putative PB1 domain, Zinc finger, ZZ-type, UBA-like, Next to BRCA1, central domain protein.
   
 0.952
A0A251TJ94
Putative PB1 domain, Zinc finger, ZZ-type, UBA-like, Next to BRCA1, central domain protein.
   
 0.952
RPN10
Putative regulatory particle non-ATPase 10.
   
 0.928
PSMD4
Putative 26S proteasome non-ATPase regulatory subunit 4.
   
 0.928
A0A251RU22
Putative UV excision repair protein Rad23, UBA-like, Ubiquilin, Ubiquitin-related domain protein.
  
  
 
0.902
A0A251U0W0
Putative UV excision repair protein Rad23, UBA-like, Ubiquitin-related domain protein.
  
  
 
0.900
A0A251SBK3
Putative zinc finger, RING/FYVE/PHD-type, Ubiquitin conjugation factor E4, core.
   
 0.888
A0A251TXB6
Putative U-box domain-containing protein.
   
 0.888
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.