STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XTR2Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (331 aa)    
Predicted Functional Partners:
A0A251T8Y4
Uncharacterized protein.
    
 0.597
A0A251SGU7
Putative phosphatidylinositol 3-and 4-kinase family protein with FAT domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.447
A0A251SUL9
Putative phosphotransferases, alcohol group as acceptor; Belongs to the PI3/PI4-kinase family.
    
 0.447
UBP22
Ubiquitinyl hydrolase 1.
    
 0.432
A0A251UQP4
Putative zinc finger, RING/FYVE/PHD-type; Belongs to the peptidase C19 family.
    
 0.432
A0A251SS95
Putative histone-fold protein.
    
 0.414
A0A251UU92
Putative histone-fold protein.
    
 0.414
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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