Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A251RW84RBR-type E3 ubiquitin transferase. (586 aa)    
Predicted Functional Partners:
RS27A
Putative ubiquitin-40S ribosomal protein S27a.
    
  0.686
A0A251T2C4
Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein.
    
  0.686
FZL
Putative FZO-like protein.
     
 0.684
A0A251RZ84
Putative F-box domain-containing protein.
    
  0.679
A0A251S2K1
Putative F-box domain-containing protein.
    
  0.679
A0A251S2R9
Putative F-box domain-containing protein.
    
  0.679
A0A251S6R9
Putative F-box domain-containing protein.
    
  0.679
A0A251T0U1
Putative F-box domain-containing protein.
    
  0.679
A0A251T5L5
Uncharacterized protein.
    
  0.679
A0A251UKK8
Putative ribosomal protein L40e.
    
  0.679
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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