STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RWE3Probable alanine--tRNA ligase, chloroplastic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (970 aa)    
Predicted Functional Partners:
ALATS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
0.944
SYM
Putative methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.579
A0A251TB02
Putative rossmann-like alpha/beta/alpha sandwich fold, Methionyl/Leucyl tRNA synthetase.
      
 0.579
A0A251VL00
Putative arginine-tRNA ligase, Methionyl/Leucyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.579
OVA1
Putative methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (CpMetRS); Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.573
A0A251VLQ6
D-aminoacyl-tRNA deacylase.
   
  
 0.558
A0A251TR59
Putative tRNA synthetase class I (I, L, M and V) family protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.537
OVA5
Lysine--tRNA ligase.
   
  
 0.522
SYK
Lysine--tRNA ligase.
   
  
 0.522
ATKRS-1
Lysine--tRNA ligase.
   
  
 0.522
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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