STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251RWN6NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (230 aa)    
Predicted Functional Partners:
A0A251TS84
Putative translation elongation factor EF1B/ribosomal protein S6 family protein.
  
 0.989
A0A251UJC4
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.974
A0A1Y3BTW3
Putative ribosomal protein S16.
  
 0.961
A0A251UZ72
Putative ribosomal protein L33, Zinc-binding ribosomal protein.
  
 
 0.957
A0A251S2J9
Putative ribosomal protein L37ae, Zinc-binding ribosomal protein.
   
 
 0.955
A0A251U6I0
Putative 28S ribosomal protein S29-related protein.
   
 0.955
A0A251UHM5
Putative ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.952
A0A251SBZ4
Putative ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein.
  
 
 0.950
A0A251S0F4
Uncharacterized protein.
  
 0.944
RR9
Putative 30S ribosomal protein S9 protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.944
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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