A0A251RY35 protein (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A251RY35

Putative DNA-binding domain-containing protein. (150 aa)

Predicted Functional Partners:

A0A251RXY1

0.723

A0A251RR84

0.708

A0A251V685

0.708

A0A251UGX5

0.657

A0A251RP33

0.579

TTL1

0.579

A0A251T2U0

0.579

A0A251V8I0

0.579

TPR10

0.574

A0A251TYJ7

0.554

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251RP33	A0A251RR84	A0A251RP33	A0A251RR84	Putative tetratricopeptide-like helical domain, Thioredoxin-like fold protein.	Putative SNF2-related, N-terminal domain-containing protein.	0.840
A0A251RP33	A0A251RXY1	A0A251RP33	A0A251RXY1	Putative tetratricopeptide-like helical domain, Thioredoxin-like fold protein.	Uncharacterized protein.	0.846
A0A251RP33	A0A251RY35	A0A251RP33	A0A251RY35	Putative tetratricopeptide-like helical domain, Thioredoxin-like fold protein.	Putative DNA-binding domain-containing protein.	0.579
A0A251RP33	A0A251TYJ7	A0A251RP33	A0A251TYJ7	Putative tetratricopeptide-like helical domain, Thioredoxin-like fold protein.	Putative nucleic acid binding protein.	0.782
A0A251RP33	A0A251V685	A0A251RP33	A0A251V685	Putative tetratricopeptide-like helical domain, Thioredoxin-like fold protein.	Uncharacterized protein.	0.840
A0A251RP33	TPR10	A0A251RP33	A0A251SM03	Putative tetratricopeptide-like helical domain, Thioredoxin-like fold protein.	Putative ankyrin repeat family protein.	0.742
A0A251RR84	A0A251RP33	A0A251RR84	A0A251RP33	Putative SNF2-related, N-terminal domain-containing protein.	Putative tetratricopeptide-like helical domain, Thioredoxin-like fold protein.	0.840
A0A251RR84	A0A251RXY1	A0A251RR84	A0A251RXY1	Putative SNF2-related, N-terminal domain-containing protein.	Uncharacterized protein.	0.896
A0A251RR84	A0A251RY35	A0A251RR84	A0A251RY35	Putative SNF2-related, N-terminal domain-containing protein.	Putative DNA-binding domain-containing protein.	0.708
A0A251RR84	A0A251T2U0	A0A251RR84	A0A251T2U0	Putative SNF2-related, N-terminal domain-containing protein.	Putative thioredoxin-like fold, N-terminal acetyltransferase A, auxiliary subunit.	0.840
A0A251RR84	A0A251TYJ7	A0A251RR84	A0A251TYJ7	Putative SNF2-related, N-terminal domain-containing protein.	Putative nucleic acid binding protein.	0.885
A0A251RR84	A0A251V685	A0A251RR84	A0A251V685	Putative SNF2-related, N-terminal domain-containing protein.	Uncharacterized protein.	0.805
A0A251RR84	A0A251V8I0	A0A251RR84	A0A251V8I0	Putative SNF2-related, N-terminal domain-containing protein.	Putative tetratricopeptide-like helical domain, Thioredoxin-like fold protein.	0.840
A0A251RR84	TPR10	A0A251RR84	A0A251SM03	Putative SNF2-related, N-terminal domain-containing protein.	Putative ankyrin repeat family protein.	0.914
A0A251RR84	TTL1	A0A251RR84	A0A251SC75	Putative SNF2-related, N-terminal domain-containing protein.	Putative tetratricopetide-repeat thioredoxin-like 1.	0.840
A0A251RXY1	A0A251RP33	A0A251RXY1	A0A251RP33	Uncharacterized protein.	Putative tetratricopeptide-like helical domain, Thioredoxin-like fold protein.	0.846
A0A251RXY1	A0A251RR84	A0A251RXY1	A0A251RR84	Uncharacterized protein.	Putative SNF2-related, N-terminal domain-containing protein.	0.896
A0A251RXY1	A0A251RY35	A0A251RXY1	A0A251RY35	Uncharacterized protein.	Putative DNA-binding domain-containing protein.	0.723
A0A251RXY1	A0A251T2U0	A0A251RXY1	A0A251T2U0	Uncharacterized protein.	Putative thioredoxin-like fold, N-terminal acetyltransferase A, auxiliary subunit.	0.846
A0A251RXY1	A0A251TYJ7	A0A251RXY1	A0A251TYJ7	Uncharacterized protein.	Putative nucleic acid binding protein.	0.907