Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A251RY92Putative mRNA capping enzyme family protein. (690 aa)    
Predicted Functional Partners:
RPB4
Putative DNA-directed RNA polymerase II subunit rpb4.
    
  0.909
RBP36A
Putative DNA-directed RNA polymerase family protein.
   
 0.901
A0A251V6S4
Putative DNA-directed RNA polymerase, alpha subunit.
   
 0.901
NRPB9A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.888
ATRPB13.6
Putative DNA-directed RNA polymerase.
    
  0.887
A0A251SHY0
Putative RNA polymerases N / 8 kDa subunit.
    
  0.853
A0A251UYQ7
Putative DNA-directed RNA polymerase, subunit N/Rpb10.
    
  0.853
A0A251RL32
Putative loricrin-related protein.
    
 0.848
A0A251S0F8
Putative tetratricopeptide-like helical domain-containing protein.
    
 0.848
A0A251SBY0
Uncharacterized protein.
    
 0.848
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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