A0A251RY99 protein (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A251RY99

Putative domain X. (161 aa)

Predicted Functional Partners:

A0A1Y3BTW3

0.680

MYST1

0.670

RS19

0.640

RS19-2

0.640

A0A251S6I0

0.566

A0A251RVU4

0.560

EMB156

0.560

A0A1Y3BTI7

0.544

A0A251SBY9

0.544

A0A251SVK4

0.544

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1Y3BTI7	A0A1Y3BTW3	A0A1Y3BTI7	A0A1Y3BTW3	Putative NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H.	Putative ribosomal protein S16.	0.893
A0A1Y3BTI7	A0A251RY99	A0A1Y3BTI7	A0A251RY99	Putative NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H.	Putative domain X.	0.544
A0A1Y3BTI7	RS19	A0A1Y3BTI7	A0A251SDW5	Putative NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H.	Putative 30S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	0.682
A0A1Y3BTI7	RS19-2	A0A1Y3BTI7	A0A251TBA4	Putative NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H.	Putative 30S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	0.682
A0A1Y3BTW3	A0A1Y3BTI7	A0A1Y3BTW3	A0A1Y3BTI7	Putative ribosomal protein S16.	Putative NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H.	0.893
A0A1Y3BTW3	A0A251RVU4	A0A1Y3BTW3	A0A251RVU4	Putative ribosomal protein S16.	Putative AAA-type ATPase family protein.	0.563
A0A1Y3BTW3	A0A251RY99	A0A1Y3BTW3	A0A251RY99	Putative ribosomal protein S16.	Putative domain X.	0.680
A0A1Y3BTW3	A0A251S6I0	A0A1Y3BTW3	A0A251S6I0	Putative ribosomal protein S16.	Putative ftsH extracellular protease family.	0.549
A0A1Y3BTW3	A0A251SBY9	A0A1Y3BTW3	A0A251SBY9	Putative ribosomal protein S16.	Putative AAA-type ATPase family protein.	0.550
A0A1Y3BTW3	A0A251SVK4	A0A1Y3BTW3	A0A251SVK4	Putative ribosomal protein S16.	Putative ftsH extracellular protease family.	0.541
A0A1Y3BTW3	EMB156	A0A1Y3BTW3	A0A251V7X2	Putative ribosomal protein S16.	Putative FTSH protease 12.	0.541
A0A1Y3BTW3	RS19	A0A1Y3BTW3	A0A251SDW5	Putative ribosomal protein S16.	Putative 30S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	0.963
A0A1Y3BTW3	RS19-2	A0A1Y3BTW3	A0A251TBA4	Putative ribosomal protein S16.	Putative 30S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	0.963
A0A251RVU4	A0A1Y3BTW3	A0A251RVU4	A0A1Y3BTW3	Putative AAA-type ATPase family protein.	Putative ribosomal protein S16.	0.563
A0A251RVU4	A0A251RY99	A0A251RVU4	A0A251RY99	Putative AAA-type ATPase family protein.	Putative domain X.	0.560
A0A251RVU4	A0A251S6I0	A0A251RVU4	A0A251S6I0	Putative AAA-type ATPase family protein.	Putative ftsH extracellular protease family.	0.946
A0A251RVU4	A0A251SBY9	A0A251RVU4	A0A251SBY9	Putative AAA-type ATPase family protein.	Putative AAA-type ATPase family protein.	0.925
A0A251RVU4	A0A251SVK4	A0A251RVU4	A0A251SVK4	Putative AAA-type ATPase family protein.	Putative ftsH extracellular protease family.	0.949
A0A251RVU4	EMB156	A0A251RVU4	A0A251V7X2	Putative AAA-type ATPase family protein.	Putative FTSH protease 12.	0.887
A0A251RVU4	RS19	A0A251RVU4	A0A251SDW5	Putative AAA-type ATPase family protein.	Putative 30S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	0.513