STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251S083Uncharacterized protein. (1121 aa)    
Predicted Functional Partners:
NRPB9A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.744
ATRPB13.6
Putative DNA-directed RNA polymerase.
    
  0.738
RPB4
Putative DNA-directed RNA polymerase II subunit rpb4.
    
  0.693
RPAB3
Putative DNA-directed RNA polymerases I, II, and III subunit RPABC3; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.648
A0A251TIN4
Putative RNA polymerase Rpb8; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.648
A0A251VSM3
Putative RNA polymerase, Rpb8.
    
  0.648
ACCC2
Putative biotin carboxylase 2, chloroplastic.
    
 0.644
A0A251S8A8
Putative ATP-grasp fold, Biotin carboxylation domain protein.
    
 0.644
MCCA
Putative methylcrotonyl-CoA carboxylase alpha chain.
    
 0.644
A0A251VS06
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.644
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.