STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251S3S0Putative peptidase S59, nucleoporin. (793 aa)    
Predicted Functional Partners:
A0A251RQS7
Putative transducin/WD40 repeat-like superfamily protein.
   
 0.982
A0A251RUF2
Putative transducin family protein / WD-40 repeat family protein; Belongs to the WD repeat SEC13 family.
    
 0.982
SEC13
Putative SEC13-like protein; Belongs to the WD repeat SEC13 family.
    
 0.982
RAE1L
Putative mRNA export factor.
   
 0.982
A0A251TD29
Putative WD40/YVTN repeat-like-containing domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.977
A0A251V9L4
Putative WD40/YVTN repeat-like-containing domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.977
A0A251V3L1
Nuclear pore protein.
   
 0.910
A0A251SJM1
Putative nucleoporin.
   
 0.893
A0A251U183
Putative embryo defective protein.
    
 0.877
A0A251T090
Putative reverse transcriptase domain, Nucleoporin, Nup155-like protein.
   
 0.840
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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