STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA6GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. (324 aa)    
Predicted Functional Partners:
DET1
Putative light-mediated development protein DET1.
      
 0.680
CRY1
Putative cryptochrome 1.
   
  
 0.648
PLDA1-3
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
      
 0.626
CRY2
Putative cryptochrome 2.
   
  
 0.599
ATGSL10
Putative glucan synthase-like 10.
      
 0.595
PHYE
Putative phytochrome E.
      
 0.588
A0A251V1D7
Putative phytochrome.
      
 0.588
MBF1C
Putative multiprotein bridging factor 1C.
      
 0.588
GATA-2
Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
      
 0.573
A0A251V0K3
Putative amidase.
      
 0.573
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.