STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251S4L4Putative transcription factor TFIIB. (320 aa)    
Predicted Functional Partners:
A0A251THG6
Putative homeodomain-like, SANT domain, Transcription factor TFIIIB component B.
    
 0.969
A0A251SSP3
Putative tetratricopeptide-like helical domain-containing protein.
    
 0.946
A0A251TY21
Putative tetratricopeptide repeat (TPR)-containing protein.
    
 0.946
A0A251UK88
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.934
NRPC2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.934
TBP2
Putative TATA-box-binding protein 2.
   
 0.923
TBP2-2
Putative TATA-box-binding protein 2.
   
 0.923
A0A251V5K8
Putative TATA-box binding protein.
   
 0.923
A0A251TYD3
Putative SIN-like family protein.
    
 0.916
A0A251SNX8
Putative RNA polymerase III, subunit Rpc25.
    
 0.913
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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