STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251S539Putative BRCT domain, Zinc finger, RING/FYVE/PHD-type. (1443 aa)    
Predicted Functional Partners:
A0A251UKP7
Putative RAD3-like DNA-binding helicase protein.
   
 0.982
ATRAD3
Putative ataxia telangiectasia-mutated and RAD3-related protein; Belongs to the PI3/PI4-kinase family.
    
 0.952
A0A251UGD7
Putative BRCT domain-containing protein.
  
  
 
0.902
MCM31
DNA helicase.
   
 
 0.894
A0A251SH73
Putative CDC45 family.
   
 
 0.878
CDC45
Putative cell division cycle 45.
   
 
 0.878
NBS1
Putative nijmegen breakage syndrome 1.
  
 
 0.867
A0A251SHN0
Putative DDT domain, subgroup.
    
 0.840
A0A251T779
Putative zinc-finger domain of monoamine-oxidase A repressor R1 protein.
    
 0.840
ATRAD9
Putative cell cycle checkpoint control protein family.
    
 0.840
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.