STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251S5C5CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (254 aa)    
Predicted Functional Partners:
A0A251TCX5
Putative LYR family of Fe/S cluster biogenesis protein.
   
 0.972
A0A251VQF5
Putative AMP-dependent synthetase and ligase family protein.
  
 0.971
A0A251T6B2
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.970
A0A251VAE8
Putative NADH-ubiquinone oxidoreductase-related protein.
   
 0.970
A0A251T1P1
Putative NADH-ubiquinone oxidoreductase B18 subunit, putative.
   
 0.964
A0A251VQT7
Putative NAD(P)-binding Rossmann-fold superfamily protein.
   
 0.964
A0A251VP01
Putative malonyl-CoA-acyl carrier protein transacylase.
  
 0.948
A0A251VP70
Putative catalytic,transferase,[acyl-carrier-protein] S-malonyltransferase,binding protein.
  
 0.948
A0A251S0P5
Putative complex I subunit NDUFS6.
   
 0.947
A0A251U6E5
Putative complex I subunit NDUFS6.
   
 0.947
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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