STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251S5E9Putative zinc finger, CCHC-type. (441 aa)    
Predicted Functional Partners:
A0A251S8U3
Putative RNA helicase HrpA, P-loop containing nucleoside triphosphate hydrolase.
   
 0.872
A0A251TGD3
Putative RNA helicase family protein.
   
 0.872
MEE5
Putative ribosomal protein S5/Elongation factor G/III/V family protein.
   
 
 0.862
A0A251SB54
Putative transducin/WD40 repeat-like superfamily protein.
   
 0.808
A0A251UTS7
Putative transducin/WD40 repeat-like superfamily protein.
   
 0.808
A0A251VNN7
Putative tetratricopeptide repeat (TPR)-like superfamily protein.
   
 
 0.800
U2A
Putative U2 small nuclear ribonucleoprotein A.
    
 
 0.722
RU2A
Putative U2 small nuclear ribonucleoprotein A.
    
 
 0.722
A0A251TKG4
Putative GCIP-interacting family protein.
    
  0.676
A0A251TLX8
Putative mRNA splicing factor SYF2.
    
  0.676
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.