STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATRBL13Putative RHOMBOID-like protein 13. (264 aa)    
Predicted Functional Partners:
A0A251URG1
Putative rhomboid-related intramembrane serine protease family protein.
      
 0.584
A0A251SI89
Putative rhomboid-related intramembrane serine protease family protein.
      
 0.543
A0A251TTE9
Putative rhomboid protein-related protein.
   
  
 0.537
A0A251TJE7
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
      
 0.503
ATRBL11
Putative rhomboid-like protein 11.
      
 0.503
ATRBL1
RHOMBOID-like protein.
      
 0.436
A0A251V3Q4
RHOMBOID-like protein.
      
 0.436
DGP14
Putative protease Do-like 14.
      
 0.418
PSAN
Photosystem I reaction center subunit N, chloroplastic.
   
  
 0.417
ATSAE1B
Putative SUMO activating enzyme 1B.
      
 0.405
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.