STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251S5R7Putative pyridoxal phosphate-dependent transferase. (592 aa)    
Predicted Functional Partners:
A0A251TUA3
Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.
   
 
 0.951
A0A251S1W9
Putative ribosomal RNA large subunit methyltransferase E.
   
  
 0.657
A0A251T6W4
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
  
 0.657
A0A251UCX9
Putative ftsJ-like methyltransferase family protein.
   
  
 0.657
A0A251SDV7
tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.627
A0A251TWI5
tRNA (adenine(58)-N(1))-methyltransferase.
  
  
 0.612
A0A251T6U5
Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein.
   
  
 0.596
A0A251TQ79
Putative helicase Cas3, CRISPR-associated, core.
   
  
 0.596
A0A251USD9
Putative transducin/WD40 repeat-like superfamily protein.
   
    0.595
A0A251UEE8
Uncharacterized protein.
   
    0.594
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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