STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMB25Putative DEAD/DEAH box helicase, putative. (1168 aa)    
Predicted Functional Partners:
A0A251RYM5
Putative tetratricopeptide repeat (TPR)-like superfamily protein.
   
 0.992
ATRRP4
Putative ribosomal RNA processing 4.
   
 0.968
A0A251SBT0
Putative nucleic acid-binding, OB-fold-like protein.
   
 0.955
A0A251VTL3
Putative ribosomal protein S5 domain 2-like superfamily protein.
   
 0.943
A0A251S071
Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.
    
 0.934
CER7
Putative 3'-5'-exoribonuclease family protein.
    
 0.934
A0A251STQ5
Putative sas10/Utp3/C1D family.
   
 0.933
A0A251RX66
Putative exosome complex component rrp40.
   
 0.932
A0A251S2L5
Putative exosome complex component rrp40.
   
 0.932
A0A251UJ25
Putative 3'-5'-exoribonuclease family protein.
   
 0.931
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.