STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SC5760S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (572 aa)    
Predicted Functional Partners:
A0A251UZX8
Putative sequence-specific DNA binding transcription factor.
   
 
 0.972
A0A251SYX3
Putative ribosomal protein L24e family protein.
   
 
 0.969
RLP24
Putative ribosome biogenesis protein RLP24.
   
 
 0.969
A0A251SEM0
Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein.
   
 
 0.963
A0A251SHR0
Putative P-loop containing nucleoside triphosphate hydrolase.
   
 
 0.963
A0A251T580
Putative peptidase M24, methionine aminopeptidase.
   
 
 0.955
EBP1
Putative ERBB-3 BINDING PROTEIN 1.
   
 
 0.955
CHLG
Putative chlorophyll synthase protein.
   
 
 0.955
NOG1
Putative nucleolar GTP-binding protein 1.
  
 
 0.953
A0A251TA48
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
  
 
 0.953
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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