STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SCF8Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (363 aa)    
Predicted Functional Partners:
A0A251S4L0
Putative transketolase, bacterial-like protein.
  
 0.923
TKTC
Putative transketolase protein.
  
 0.923
TKTC-2
Putative transketolase protein.
  
 0.923
RPI2
Putative ribose-5-phosphate isomerase 2.
    
 0.921
RPIA
Putative ribose-5-phosphate isomerase A.
    
 0.921
A0A251T0X7
Putative ribose 5-phosphate isomerase, type A protein.
    
 0.921
A0A251TBV8
Putative nagB/RpiA/CoA transferase-like superfamily protein.
    
 0.921
RPIA-2
Putative ribose-5-phosphate isomerase A.
    
 0.921
PGMC
Putative phosphoglucomutase, cytoplasmic; Belongs to the phosphohexose mutase family.
     
 0.918
PGMP
Putative phosphoglucomutase protein.
     
 0.918
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: low (18%) [HD]