STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYB88Putative myb domain protein 88. (426 aa)    
Predicted Functional Partners:
EPF1
Putative epidermal patterning factor 1.
      
 0.697
SCRM2
Putative basic helix-loop-helix (BHLH) DNA-binding superfamily protein.
      
 0.697
SPCH
Putative basic helix-loop-helix (BHLH) DNA-binding superfamily protein.
      
 0.692
MUTE
Putative basic helix-loop-helix (BHLH) DNA-binding superfamily protein.
      
 0.635
EPF2
Putative membrane lipoprotein.
      
 0.626
PIN3
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
      
 0.528
NTT
Putative C2H2-type zinc finger family protein.
   
 
 0.479
WEI8
Putative tryptophan aminotransferase.
    
 
 0.479
UVR3
Putative DNA photolyase family protein.
   
  
 0.473
GIF2
Putative GRF1-interacting factor 2.
      
 0.472
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.