STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BUD20Putative zinc finger protein bud20. (119 aa)    
Predicted Functional Partners:
A0A251SYX3
Putative ribosomal protein L24e family protein.
   
 
 0.980
RLP24
Putative ribosome biogenesis protein RLP24.
   
 
 0.980
A0A251STW7
Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
   
 
 0.978
A0A251SPL8
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 
 0.967
A0A251TQB6
Putative RNA-binding (RRM/RBD/RNP motifs) family protein.
   
 
 0.967
A0A251U2T7
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.962
RPF2
Putative ribosome production factor.
   
 
 0.944
NOG1
Putative nucleolar GTP-binding protein 1.
   
 
 0.944
A0A251TA48
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.944
A0A251U5A5
Putative brix domain-containing protein.
   
 
 0.944
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.