A0A251SGP4 protein (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A251SGP4

Putative intron-binding protein aquarius. (271 aa)

Predicted Functional Partners:

A0A251VNN7

0.988

A0A251VCQ9

0.973

PRP19

0.972

MAC3A

0.972

MEE5

0.966

ATCDC5

0.963

A0A251RP59

0.962

A0A251UA86

0.962

A0A251VQN2

0.962

A0A251VQT0

0.962

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251RP59	A0A251SGP4	A0A251RP59	A0A251SGP4	Putative suppressor of forked, Tetratricopeptide-like helical domain protein.	Putative intron-binding protein aquarius.	0.962
A0A251RP59	A0A251UA86	A0A251RP59	A0A251UA86	Putative suppressor of forked, Tetratricopeptide-like helical domain protein.	Putative crooked neck protein, putative / cell cycle protein, putative.	0.901
A0A251RP59	A0A251VCQ9	A0A251RP59	A0A251VCQ9	Putative suppressor of forked, Tetratricopeptide-like helical domain protein.	Uncharacterized protein.	0.989
A0A251RP59	A0A251VNN7	A0A251RP59	A0A251VNN7	Putative suppressor of forked, Tetratricopeptide-like helical domain protein.	Putative tetratricopeptide repeat (TPR)-like superfamily protein.	0.998
A0A251RP59	A0A251VQN2	A0A251RP59	A0A251VQN2	Putative suppressor of forked, Tetratricopeptide-like helical domain protein.	Putative tetratricopeptide-like helical domain-containing protein.	0.586
A0A251RP59	ATCDC5	A0A251RP59	A0A251U5N8	Putative suppressor of forked, Tetratricopeptide-like helical domain protein.	Putative cell division cycle 5.	0.980
A0A251RP59	MAC3A	A0A251RP59	A0A251VQJ2	Putative suppressor of forked, Tetratricopeptide-like helical domain protein.	Putative MOS4-associated complex 3A.	0.956
A0A251RP59	MEE5	A0A251RP59	A0A251TSF9	Putative suppressor of forked, Tetratricopeptide-like helical domain protein.	Putative ribosomal protein S5/Elongation factor G/III/V family protein.	0.973
A0A251RP59	PRP19	A0A251RP59	A0A251TCN1	Putative suppressor of forked, Tetratricopeptide-like helical domain protein.	Putative pre-mRNA-processing factor 19.	0.956
A0A251SGP4	A0A251RP59	A0A251SGP4	A0A251RP59	Putative intron-binding protein aquarius.	Putative suppressor of forked, Tetratricopeptide-like helical domain protein.	0.962
A0A251SGP4	A0A251UA86	A0A251SGP4	A0A251UA86	Putative intron-binding protein aquarius.	Putative crooked neck protein, putative / cell cycle protein, putative.	0.962
A0A251SGP4	A0A251VCQ9	A0A251SGP4	A0A251VCQ9	Putative intron-binding protein aquarius.	Uncharacterized protein.	0.973
A0A251SGP4	A0A251VNN7	A0A251SGP4	A0A251VNN7	Putative intron-binding protein aquarius.	Putative tetratricopeptide repeat (TPR)-like superfamily protein.	0.988
A0A251SGP4	A0A251VQN2	A0A251SGP4	A0A251VQN2	Putative intron-binding protein aquarius.	Putative tetratricopeptide-like helical domain-containing protein.	0.962
A0A251SGP4	A0A251VQT0	A0A251SGP4	A0A251VQT0	Putative intron-binding protein aquarius.	Uncharacterized protein.	0.962
A0A251SGP4	ATCDC5	A0A251SGP4	A0A251U5N8	Putative intron-binding protein aquarius.	Putative cell division cycle 5.	0.963
A0A251SGP4	MAC3A	A0A251SGP4	A0A251VQJ2	Putative intron-binding protein aquarius.	Putative MOS4-associated complex 3A.	0.972
A0A251SGP4	MEE5	A0A251SGP4	A0A251TSF9	Putative intron-binding protein aquarius.	Putative ribosomal protein S5/Elongation factor G/III/V family protein.	0.966
A0A251SGP4	PRP19	A0A251SGP4	A0A251TCN1	Putative intron-binding protein aquarius.	Putative pre-mRNA-processing factor 19.	0.972
A0A251UA86	A0A251RP59	A0A251UA86	A0A251RP59	Putative crooked neck protein, putative / cell cycle protein, putative.	Putative suppressor of forked, Tetratricopeptide-like helical domain protein.	0.901