STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SGZ3Putative cleavage and polyadenylation specificity factor (CPSF) A subunit protein. (1346 aa)    
Predicted Functional Partners:
A0A251VBB4
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.988
A0A251TNY2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.985
A0A251SRL4
Putative hydroxyproline-rich glycoprotein family protein.
   
 0.984
A0A251SWW2
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.981
SF3B1
Putative U2 snRNP component prp10.
   
 0.981
A0A251VKM7
Putative splicing factor, putative.
   
 0.981
A0A251S0M4
Putative PSP, proline-rich.
   
 0.980
A0A251UVR3
Putative proline-rich spliceosome-associated (PSP) family protein.
   
 0.980
A0A251SKN1
Putative nucleotide-binding alpha-beta plait domain-containing protein.
    
 0.979
A0A251UBJ3
Putative nucleotide-binding alpha-beta plait domain-containing protein.
    
 0.979
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.