STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPLATEPutative ARM repeat superfamily protein. (1160 aa)    
Predicted Functional Partners:
A0A251SY24
Putative bystin.
   
 
 0.980
A0A251SEB6
Bms1-type G domain-containing protein.
   
 
 0.972
A0A251ULD5
Putative ribosome biogenesis protein BMS1/TSR1, AARP2CN.
   
 
 0.972
IMP4
Putative ribosomal RNA processing Brix domain protein.
   
   0.965
A0A251SRT8
Putative transducin family protein / WD-40 repeat family protein.
   
   0.965
A0A251VMZ1
Putative transducin family protein / WD-40 repeat family protein.
   
   0.964
A0A251SGC7
Putative sas10/U3 ribonucleoprotein (Utp) family protein.
   
   0.963
A0A251TYN1
Uncharacterized protein.
   
 
 0.961
A0A251T804
Putative RNA cyclase family protein.
   
 
 0.960
A0A251U7K7
Putative RNA-binding KH domain-containing protein.
   
 
 0.955
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.